• Tomomi Sato, Kaito Saito, Tsubasa Oyu, Sachiko Tsuda, Tomohiro Kurisaki, Takeshi Kajihara, Masabumi Nagashima, The effects of paroxetine-induced transient apoptosis and brain remodeling on social behavior in developing zebrafish, bioRxiv, 2023, https://doi.org/10.1101/2023.11.10.566506.

• Asuka Shiraishi, Ayane Hayashi, Narumi Fukuda, Mari Hishinuma, Hiroaki Miyazawa, Sachiko Tsuda, In vivo long-term voltage imaging by genetically encoded voltage indicator reveals spatiotemporal dynamics of neuronal populations during development,  bioRxiv, 2023, https://doi.org/10.1101/2023.05.25.540669.

• Kanae Hiyoshi, Asuka Shiraishi, Narumi Fukuda and Sachiko Tsuda*, In vivo wide-field voltage imaging in zebrafish with voltage sensitive dye and genetically encoded voltage indicator, Development, Growth & Differentiation, Vol. 63, 417-428, 2021.

• Kanae Hiyoshi, Kaito Saito, Narumi Fukuda, Takahisa Matsuzaki, Hiroshi Yoshikawa and Sachiko Tsuda*, Two-photon laser ablation and in vivo wide-field imaging of inferior olive neurons revealed the recovery of olivocerebellar circuits in zebrafish. International Journal of Environmental Research and Public Health, Vol. 18, 8357, 2021.

• Tatsuya Yuikawa, Masaaki Ikeda, Sachiko Tsuda, Shinji Saito, Kyo Yamasu, Involvement of Oct4-type transcription factor Pou5f3 in posterior spinal cord formation in zebrafish embryos. Development, growth & differentiation,  Vol. 63(6), 306-322, 2021.

• Kazuki Takahashi, Yuki Ito, Mami Yoshimura, Masataka Nikaido, Tatsuya Yuikawa, Akinori Kawamura, Sachiko Tsuda, Daichi Kage and Kyo Yamasu, A globin-family protein, Cytoglobin 1, is involved in the development of neural crest-derived tissues and organs in zebrafish. Developmental Biology, Vol. 472, 1-17, 2021.

• Chihiro Inomata, Tatsuya Yuikawa, Yukiko Nakayama-Sadakiyo, Kana Kobayashi, Masaaki Ikeda, Mizuki Chiba, Chihiro Konishi, Akiko Ishioka, Sachiko Tsuda and Kyo Yamasu, Involvement of an Oct4-related PouV gene, pou5f3/pou2, in neurogenesis in the early neural plate of zebrafish embryos. Developmental Biology, Vol. 457, 30-42, 2020.

• Kota Abe, Atsuko Shimada, Sayaka Tayama, Hotaka Nishikawa, Takuya Kaneko, Sachiko Tsuda, Akari Karaiwa, Takaaki Matsui, Tohru Ishitani and Hiroyuki Takeda, Horizontal boundary cells, a special group of somitic cells, play crucial roles in the formation of dorsoventral compartments in teleost somite. Cell Reports, Vol. 27, 928-939, 2019.

• Sachiko Tsuda*, Kanae Hiyoshi, Hiroaki Miyazawa, Risa Kinno and Kyo Yamasu, 4D imaging identifies dynamic migration and the fate of gbx2-expressing cells in the brain primordium of zebrafish. Neuroscience Letters, Vol. 690, 112-119, 2019.

• Kanoko Okumura, Hisaya Kakinuma, Ryunosuke Amo, Hitoshi Okamoto, Kyo Yamasu and Sachiko Tsuda*, Optical measurement of neuronal activity in the developing cerebellum of zebrafish using voltage sensitive dye imaging. NeuroReport, Vol. 29, 1349-1354, 2018. 

• Chika Ikenoya, Shota Takemi, Arisa Kaminoda, Sayaka Aizawa, Shiomi Ojima, Zhi Gong, Rakhi Chacrabati, Daisuke Kondo, Reiko Wada, Toru Tanaka, Sachiko Tsuda, Takafumi Sakai and Ichiro Sakata, b-Oxidation in ghrelin-producing cells is important for ghrelin acyl-modification. Scientific Reports, Vol. 8, 9176, 2018.

• Hiroaki Miyazawa, Kanoko Okumura, Kanae Hiyoshi, Kazuhiro Maruyama, Hisaya Kakinuma, Ryunosuke Amo, Hitoshi Okamoto, Kyo Yamasu and Sachiko Tsuda*, Optical interrogation of neuronal circuitry in zebrafish using genetically encoded voltage indicators. Scientific Reports, Vol. 8, 6048, 2018.

• Zhe Wang, Yukiko Nakayama, Sachiko Tsuda and Kyo Yamasu, The role of gastrulation brain homeobox 2 (gbx2) in the development of the ventral telencephalon in zebrafish embryos. Differentiation, Vol. 99, 28-40, 2018.

• Takashi Mikami, Kazuma Ito, Hetzel O. Diaz-Tartera, Per M. Hellström, Erito Mochiki, Shota Takemi, Toru Tanaka, Sachiko Tsuda, Takamichi Jogahara, Ichiro Sakata and Takafumi Sakai, Study of termination of postprandial gastric contractions in humans, dogs and Suncus murinus: role of motilin- and ghrelin-induced strong contraction. Acta Physiologica, Vol. 222, 12933, 2018.

• Yukiko Nakayama, Chihiro Inomata, Tatsuya Yuikawa, Sachiko Tsuda and Kyo Yamasu, Comprehensive analysis of the target genes in zebrafish embryos revealed gbx2 involvement in neurogenesis. Developmental Biology, Vol. 430, 237-248, 2017.

• Anupom Mondal, Kouhei Koyama, Takashi Mikami, Taichi Horita, Shota Takemi, Sachiko Tsuda, Ichiro Sakata and Takafumi Sakai, Underlying mechanism of the cyclic migrating motor complex in Suncus murinus: a change in gastrointestinal pH is the key regulator. Physiological Reports, Vol. 5, e13105, 2017.

• Jinsook Kim, Soojung Lee, Sachiko Tsuda, Xuying Zhang, Brent Asrican, Bernd Gloss, Guoping Feng and George J. Augustine, Optogenetic mapping of cerebellar inhibitory circuitry reveals spatially biased coordination of interneurons via electrical synapses. Cell Reports, Vol. 7, 1601-1613, 2014.

• Brent Asrican, George Augustine, Ken Berglund, Susu Chen, Nick Chow, Karl Deisseroth, Guoping Feng, Bernd Gloss, Riichiro Hira, Carolin Hoffmann, Haruo Kasai, Malvika Katarya, Jinsook Kim, John Kudolo, Li Ming Lee, Shun Qiang Lo, James Mancuso, Masanori Matsuzaki, Ryuichi Nakajima, Li Qiu, Gregory Tan, Yanxia Tang, Jonathan T. Ting, Sachiko Tsuda, Lei Wen, Xuying Zhang and Shengli Zhao, Next-generation transgenic mice for optogenetic analysis of neural circuits. Frontiers in Neural Circuits, Vol. 7, 1-24, 2013.

• Sachiko Tsuda, Michelle Z.L. Kee, Catarina Cunha, Jinsook Kim, Ping Yan, Leslie M. Loew and George J. Augustine, Probing the function of neuronal populations: Combining micromirror-based optogenetic photostimulation with voltage-sensitive dye imaging. Neuroscience Research, Vol. 75, 76-81, 2013.

• James J. Mancuso, Jinsook Kim, Soojung Lee, Sachiko Tsuda, Nicholas B.H. Chow and George J. Augustine, Optogenetic probing of functional brain circuitry. Experimental Physiology, Vol. 96, 26-33, 2011.

• Sachiko Tsuda, Tadao Kitagawa, Shigeo Takashima, Shuichi Asakawa, Nobuyoshi Shimizu, Hiroshi Mitani, Akihiro Shima, Makiko Tsutsumi, Hiroshi Hori, Kiyoshi Naruse, Yuji Ishikawa and Hiroyuki Takeda, FAK-mediated extracellular signals are essential for interkinetic nuclear migration and planar divisions in the neuroepithelium. Journal of Cell Science, Vol. 123, 484-496, 2010.

• Shigeo Takashima, Atsuko Shimada, Daisuke Kobayashi, Hayato Yokoi, Takanori Narita, Tomoko Jindo, Takahiro Kage, Tadao Kitagawa, Tetsuaki Kimura, Koshin Sekimizu, Akimitsu Miyake, Davin Setiamarga, Ryohei Murakami, Sachiko Tsuda, Shinya Ooki, Ken Kakihara, Motoki Hojo, Kiyoshi Naruse, Hiroshi Mitani, Akihiro Shima, Yuji Ishikawa, Kazuo Araki, Yumiko Saga and Hiroyuki Takeda, Phenotypic analysis of a novel chordin mutant in medaka. Developmental Dynamics, Vol. 236, 2298-2310, 2007.

• Motoki Hojo, Shigeo Takashima, Daisuke Kobayashi, Akira Sumeragi, Atsuko Shimada, Tatsuya Tsukahara, Hayato Yokoi, Takanori Narita, Tomoko Jindo, Takahiro Kage, Tadao Kitagawa, Tetsuaki Kimura, Koshin Sekimizu, Akimitsu Miyake, Davin Setiamarga, Ryohei Murakami, Sachiko Tsuda, Shinya Ooki, Ken Kakihara, Kiyoshi Naruse and Hiroyuki Takeda, Right-elevated expression of charon is regulated by fluid flow in medaka Kupffer's vesicle. Development,  Growth & Differentiation, Vol. 49, 395-405, 2007.

• In vivo optical detection of membrane potentials in the cerebellum: voltage imaging of zebrafish, In Measuring Cerebellar Function (Ed: Sillito S)   

Kanae Hiyoshi, Narumi Fukuda, Asuka Shiraishi, Sachiko Tsuda,  Springer, 2021, 229-244.

• Optogenetics. In: Gerlai, R.T. (Ed.), Behavioral and Neural Genetics of Zebrafish. 

    Sachiko Tsuda, Elsevier, Academic Press, 2020, 279–292.

• Optogenetics Enables Selective Control of Cellular Electrical Activity. “Molecular Neuroendocrinology: From Genome to Physiology” 

    Ryuichi Nakajima, Sachiko Tsuda, Jinsook Kim, George Augustine, Wiley-Blackwell, 2016, 275–300.